BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F12SP1|AL430743
(669 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1437 736 0.0
>3x_Contig1437
Length = 8480
Score = 736 bits (360), Expect = 0.0
Identities = 479/523 (91%), Gaps = 11/523 (2%)
Strand = Plus / Minus
Query: 1 tagctgcaaaacctggatcagaattgatgggcaactggaacggtatcaaygaaaaatttc 60
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 512 tagctgcaaaacctggatcagaattgatgggcaactggaacggcatcaacgaaaaatttc 453
Query: 61 tcttctmgaawttttmwggttgtttatcctctgacctccaactttcttccttctgatcaa 120
|||||| ||| |||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 452 tcttctcgaatttttctggttgtttatcctctgacctccaactttcttccttctg-tc-a 395
Query: 121 acaacttgtttcaatmaaaatttatcttttaatcaactcatatttcatctttttatmaat 180
||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||
Sbjct: 394 acaacttgtttcaatcaacatttatcttttaatcaactcctatttcatctttttatccat 335
Query: 181 tatctgcctcaattatgtattctttacaagcwcataacagaagtatmatmaaamaaacta 240
|||||||||| ||| |||||||||||||||| |||||||||||||| || ||| ||||||
Sbjct: 334 tatctgcctctatt-tgtattctttacaagctcataacagaagtatcatcaaacaaacta 276
Query: 241 tcatcmaactgtaagttgaaagaaatctgtgaaaaaatamacaacaacaaaamtcacccc 300
||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 275 tcatccaactgtaagttgaaagaaatctgtgaaaaaatacacaacaacaaaactcacccc 216
Query: 301 cagtcgattacactttaaaamaaaacccaaattatctttgttgaagccataaaataataa 360
|||||| | |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cagtcgtt---cctttaaaacaaaacccaaattatctttgttgaagccataaaataataa 159
Query: 361 agctttgtttgcaaatttaagaatactataatatastastccaaactccattataccgta 420
||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||
Sbjct: 158 agctttgtttgcaaatttaagaatactataatatactactccaaactccat--ttccgt- 102
Query: 421 tgaaataagttgcagtagcctcaatattatattaadraatattaatctcgttaaaaaaag 480
||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 101 tgaaataagttgcagtagcctcaatattatattaaaacct-ttactctcgttaaaaaaag 43
Query: 481 aattaagattcatatcatcaagagwcgtgaaawcgttcaagat 523
||||||||||||| |||||||||| ||||| | ||||||||||
Sbjct: 42 aattaagattcat-tcatcaagagtcgtgacatcgttcaagat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4937
Number of Sequences: 1807
Number of extensions: 4937
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 1
length of query: 669
length of database: 10,358,551
effective HSP length: 16
effective length of query: 653
effective length of database: 10,329,639
effective search space: 6745254267
effective search space used: 6745254267
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)